Consumables

PM980-XPOptic fiber designSingle Mode Polarization-Maintaining Fiber, 970 - 1550 nm, PANDA-
mVPI-iCre-mVPIp(A)Virus constructsingle-stranded genome-
rAAV-hSyn-fDIO-CRE-mCherry-WPRE-hGH polyAVirus construct--
rAAV-hSyn-ArchT-EGFP-WPRE-hGH polyAVirus construct--
mDlx-HBB-chI-EGFP-SV40p(A)Virus constructself-complementary genome-
pAAV.hSyn.iGluSnFR3.v857.GPIVirus constructPI: Podgorski. Activity: Constitutive-
rAAV-CAG-mCherry-WPRE-hGH polyAVirus construct--
AAV1-hSyn-Cre-P2A-GFPVirus constructTiter: ≥1*10E13vg/ml. Volume: 50ul-
FG105LVAOptic fiber designØ105 µm Core, 0.10 NA, Step-Index Multimode Optical Fiber-
AAV-CaMKIIa-OptoA1-EYFPVirus constructOpto-XRs  (AAV5)-
hSyn1-chI-HyPer3-WPRE-bGHp(A)Virus constructsingle-stranded genome-
hEF1α-dlox-mRpl22_3xHA_IRES_EYFP(rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-
hGFAP-hHBbI/E-Peredox_mCherry-WPRE-bGHp(A)Virus constructsingle-stranded genome-
AAV9-hsyn-NE1m(NE2.1)Virus constructTiter: ≥1*10E13vg/ml, 50ul-
hGFAP-SF_iGluSnFR(A184S)-WPRE-bGHp(A)Virus constructsingle-stranded genome-
mCaMKIIα-4xhMTS_jGCaMP8m-WPRE-bGHp(A)Virus constructsingle-stranded genome-
pAAV-CamKII-ArchT-GFP (PV2527)Virus constructActivity: Constitutive. PI: Boyden-
pAAV-nEF-Con/Fon-Arch3.3-p2a-EYFPVirus constructActivity: Cre and Flp dependent. PI: Deisseroth-
rAAV-CAG-Flex-TVA(66T)-mCherry-WPRE-hGH polyAVirus construct--
rAAV-Mash1-CRE-WPRE-hGH polyAVirus construct--
rAAV-CaMKIIa-DIO-hM3D(Gq)-EGFP-WPREsVirus construct--
rAAV-CaMKIIa-C1V1-EGFP-WPRE-hGH polyAVirus construct--
shortCAG-dlox-SomArchon_EGFP(rev)-dlox-WPRE-SV40p(A)Virus constructsingle-stranded genome-
pAAV-syn-FLEX-jYCaMP1sVirus constructPI: Podgorski. Activity: Cre dependent-
rAAV-GFaABC1D-EYFP-SV40 pAVirus construct--
rAAV-Ki67-hChr2(H134R)-EYFP-WPRE-hGH polyAVirus construct--
FG910UECOptic fiber designØ910 µm Core, 0.22 NA, High OH TECS Double-Clad Multimode Fiber-
shortCAG-AlloLite(Ctrl)-WPRE-SV40p(A)Virus constructsingle-stranded genome-
rAAV-Ef1α-DIO-TVA-P2A-NLS-dTomato-WPRE-hGH polyAVirus construct--
rAAV-Tmem119-EYFP-WPRE-hGH polyAVirus construct--
AAV9-CaMKIIa-DIO-hM3D(Gq)-mCherryVirus constructTiter: ≥1*10E13vg/ml. Volume: 50ul-
pGP-AAV-syn-flex-iGABASnFR2-WPREVirus constructPI: GENIE. Activity: Cre dependent-
rAAV-NPY-mCherry-WPRE-bGH polyAVirus construct--
hSyn1-DreO-bGHp(A)Virus constructsingle-stranded genome-
hSyn1-chI-dlox-PSAM4_GlyR_IRES_EGFPmono(rev)-dlox-WPRE-SV40p(A)Virus constructsingle-stranded genome-
1060XPOptic fiber designSingle Mode Fiber, 980 - 1600 nm, Ø125 µm Cladding-
mCaMKIIα-hM3D(Gq)_mCherry-WPRE-hGHp(A)Virus constructsingle-stranded genome-
FG200UCCOptic fiber designØ200 µm Core, 0.22 NA, High OH TECS Double-Clad Multimode Fiber-
AAV-GFAP-hChR2(H134R)-mCherryVirus constructOptical Excitation: ChR2-GFAP (AAV1, 2, 5 & 8)-
AAV9-CaMKIIa-C1V1-TS-mCherryVirus constructTiter: ≥1*10E13vg/ml. Volume: 50ul-
pAAV-FLEX-ArchT-tdTomatoVirus constructActivity: Cre dependent. PI: Boyden-
mPer2-ELuc_PEST-SV40p(A)Virus constructsingle-stranded genome-
rAAV-RAM-d2tTA::TRE-FLEX-tdTomato-WPRE-hGHpAVirus construct--
AAV9-GFAP-CreVirus constructTiter: ≥1*10E13vg/ml. Volume: 50ul-
AAV29-r5H6-hSyn-dTomatoVirus constructTiter: ≥1*10E13vg/ml Volume: 50ul-
pAAV-Ef1a-Con/Fon-oScarletVirus constructPI: Deisseroth. Activity: Cre and Flp dependent-
hGFAP-CapChR2_mScarlet-WPRE-bGH(A)Virus constructsingle-stranded genome-
AAV-CaMKIIa-C1V1(E162T)-p2A-EYFPVirus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CaMKIIa-hChR2(H134R)-EYFP Virus constructOptical Excitation: ChR2-
hSyn1-chI-dlox-EGFP_2A_DreO(rev)-dlox-WPRE-SV40p(A)Virus constructsingle-stranded genome-
pAAV-hSyn-DIO-eCB2.0Virus construct--
FP600URTOptic fiber design0.50 NA, Ø600 µm Core Multimode Fiber, High OH-
pAAV-Ef1a-DIO C1V1 (t/t)-TS-mCherryVirus constructActivity: Cre dependent. PI: Deisseroth-
AAV9-hSyn-OXTmutVirus constructTiter: ≥1*10E13vg/ml, 50ul-
pAAV.hSyn.iGluSnFr.WPRE.SV40Virus constructPI: Looger. Activity: Constitutive-
hGAD67-chI-EGFP-SV40p(A)Virus constructsingle-stranded genome-
hSyn1-chI-mCherry_2A_DreO-WPRE-SV40p(A)Virus constructsingle-stranded genome-
pAAV-hSyn1-mRuby2-GSG-P2A-GCaMP6s-WPRE-pAVirus constructPI: Bonhoeffer , Huebener , Rose. Activity: Constitutive-
hSyn1-chI-eArchT3.0-SV40p(A)Virus constructself-complementary genome-
mDlx-HBB-chI-mScarlet-I-SV40p(A)Virus constructself-complementary genome-
hEF1α-H2B_mCherry-WPRE-hGHp(A)Virus constructsingle-stranded genome-
A4x4-tet-5mm-150-200-121Silicon probe designtetrode to tetrode distance: 150µm first to last tetrode distance: 450µm See company catalog: 2018ProbeCatalog_20180515_Web, p.56-
rAAV-ETV1-1M-CRE-WPRE-hGH polyAVirus construct--
rAAV-CaMKIIa-GCaMp6m-WPRE-hGH polyAVirus construct--
FG400LEA (Ø 400/440µm, 0.22 NA)Optic fiber designØ400 µm Core Glass Clad Silica Multimode Optical Fiber, 0.22 NA-
rAAV-CFOS-mCherry-WPRE-hGH polyAVirus construct--
rAAV-CAG-iGABASnFR-WPRE-pAVirus construct--
hSyn1-EBFP2_iCre-WPRE-hGHp(A)Virus constructsingle-stranded genome-
pAAV-nEF-Con/Foff 2.0-ChR2(ET/TC)-EYFPVirus constructActivity: Cre dependent. PI: Deisseroth-
rAAV-hSyn-NES-His-CaMPARI2-F391W-Flag-HA-Myc-WPRE-SV40 polyAVirus construct--
pGP-AAV-syn-FLEX-jGCaMP7f-WPREVirus constructPI: Kim. Activity: Cre dependent-
pAAV-mDlx-GFP-Fishell-1Virus constructPI: Fishell. Activity: Constitutive-
rAAV-CAR-CRE-WPRE-hGH polyAVirus construct--
AAV9-CaMKIIa-DIO-mCherryVirus constructTiter: ≥1*10E13vg/ml Volume: 50ul-
hCMV-chI-iCre_2A_Laconic-SV40p(A)Virus constructsingle-stranded genome-
rAAV-EF1α-DIO-GCaMp6s-WPRE-hGH polyAVirus construct--
hSyn1-chI-dlox-GCaMP6m(rev)-dlox-SV40p(A)Virus constructself-complementary genome-
mCaMKIIα-NES_jRCaMP1b-WPRE-hGHp(A)Virus constructsingle-stranded genome-
hEF1α-dlox-(pre)eGRASP(p32; cyan)(rev)-dlox-WPRE-bGHp(A)Virus constructsingle-stranded genome-
hCMV-chI-dlox-EGFP(rev)-dlox-bGHp(A)Virus constructself-complementary genome-
rAAV-GLP-CRE-Flag-WPREsVirus construct--
pGP-AAV-syn-flex-iGABASnFR2(no bind)-WPREVirus constructPI: GENIE. Activity: Cre dependent-
rAAV-L7-CRE-WPRE-hGH polyAVirus construct--
rAAV-nEF1α-fDIO-GCaMp6s-WPRE-hGH polyAVirus construct--
pAAV-hSyn-dF-HA-KORD-IRES-mCitrineVirus constructCre requirement: Cre-dependent. PI: Roth-
CASI-chI[4x(shm/rNS)]-EGFP-WPRE-bGHp(A)Virus constructsingle-stranded genome-
pAV-EF1a-PGD2-1.0Virus constructTiter: ≥1*10E13vg/ml,50ul-
hSyn1-chI-dFRT-EGFP(rev)-dFRT-WPRE-hGHp(A)Virus constructsingle-stranded genome-
hSyn1-chI-SweetieTS-WPRE-bGHp(A)Virus constructsingle-stranded genome-
hSyn1-GAP43_jREX-GECO1-WPRE-hGHp(A)Virus constructsingle-stranded genome-
RG-pLV-REV-KanVirus constructFormat: Plasmid DNA, E. Coli Selection: Kan, Total Length: 4266 bp-
pAAV-CAG-tdTomatoVirus constructPI: Boyden. Activity: Constitutive-
UM22-300 Optic fiber designØ300 µm Core Solarization-Resistant, Polyimide-Coated Multimode Fiber-
P128-5Silicon probe design4 cortical channels situated at each shank above the main channels-
AAV-GFAP-EGFP-T2A-TVA-WPRE-hGH polyAVirus construct--
P2-64chSilicon probe design<p>Cambridge Neurotech P-series, 64ch, 4 shanks, poly 2, 250µm shank spacing</p>-
rAAV-CRH-EYFP-WPRE-hGH polyAVirus construct--
A2x2-tet-10mm-150-150-121Silicon probe designtetrode to tetrode distance: 150µm See company catalog 2018_ProbeCatalog_20180515_Web, p.41-
AAV2-CAG-DIO-mCherryVirus constructTiter: ≥5*10E12vg/ml Volume: 50ul-
mTH-FLPo-WPRE-bGHp(A)Virus constructsingle-stranded genome-

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Consumables

Consumables refer to items that are intended to be used once or have a limited lifespan before they need to be replaced. These include materials and products that are consumed or depleted during the course of experiments or procedures. Consumables are critical for maintaining the integrity, accuracy, and reproducibility of scientific experiments. In BrainSTEM, consumables are a shared model across users.

Types of consumable

  • Optic fiber designs: Thin, flexible fibers used for transmitting light signals, crucial for optical neural imaging and optogenetic manipulation of neurons.
  • Silicon probe designs: Microfabricated devices designed for recording or stimulating neural activity, allowing for high-resolution interfacing with neural tissue.
  • Virus constructs: Genetically engineered viruses used for delivering genes into neurons, enabling the study of gene function or the manipulation of neural activity.
  • Wire electrodes: Thin metal wires used for recording electrical signals from or delivering electrical stimulation to neurons, essential for electrophysiological studies.

Submission process

Anyone can submit consumables or submit changes to existing ones, but all submissions must be approved before they are available for usage. Please see existing entries for examples as to what to submit.

Fields

  • Name: The name of the consumable (required; must be unique).
  • Type: The type of consumable - see available types above (required).
  • Supplier: The supplier of the consumable (required).
  • Description: A description of the consumable.
  • Type specific fields: Each type has custom fields (required).

Permissions

Once a entry has been approved it becomes available to everyone.

API Access

The API allows for programmable access, enabling you to read, edit, and delete entries through the API. For details about the fields and data structure, refer to the documentation.