Consumables

Consumable name
Supplier
AAV-CaMKIIa-OptoA1-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-GFAP-hChR2(H134R)-mCherryVirus constructOptical Excitation: ChR2-GFAP (AAV1, 2, 5 & 8)-
AAV-CaMKIIa-C1V1(E162T)-p2A-EYFPVirus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CaMKIIa-hChR2(H134R)-EYFP Virus constructOptical Excitation: ChR25
AAV-EF1a-DIO-EYFPVirus constructControl Fluorophores-
AAV-EF1a-DIO-ChETA-EYFPVirus constructUltrafast Optogenetic Control: ChETA-
AAV-CaMKIIa-mCherryVirus constructControl Fluorophores-
AAV-EF1a-DIO-C1V1(E122T/E162T)-TS-EYFPVirus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CaMKIIa-C1V1(E122T/E162T)-TS-EYFP Virus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CaMKIIa-OptoD1-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-CAG-GFPVirus constructControl Vectors-
AAV-hSyn-Con/Foff hChR2(H134R)-EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-CAG-FLEX-GFPVirus constructControl Vectors-
AAV-CaMKII-hChR2(T159C)-p2A-EYFP-WPREVirus constructCell Filling Variants-
AAV-CaMKII-hChR2(E123A)-EYFPVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-CAG-FLEX-Arch-GFPVirus constructNeural Silencers (no AAV6)-
AAV-CaMKIIa-hChR2(H134R)-mCherryVirus constructOptical Excitation: ChR3-
AAV-hSyn-OptoA1-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-EF1a-DIO-hChR2(H134R)-EYFPVirus constructCre-inducible AAV: DIO-AAV-
AAV-hSyn-OptoB2-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-EF1a-DIO-OptoB2-mCherryVirus constructOpto-XRs  (AAV5)-
AAV-GFAP104-ChR2-mCherryVirus constructGFAP Vectors (AAV8)-
AAV-hSyn-eNpHR3.0-EYFP Virus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-EF1a-DIO-eNpHR3.0-mCherryVirus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CaMKIIa-C1V1(E122T/E162T)-TS-mCherryVirus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CaMKIIa-eArchT3.0-EYFPVirus constructThird-generation Optogenetic Inhibition: Arch 3.0 & ArchT 3.0-
AAV-CaMKIIa-C1V1(t/t)-TS-p2A-mCherry-WPREVirus constructCell Filling Variants-
AAV-CaMKIIa-hChR2(C128S/D156A)-EYFPVirus constructStabilized Step Function Opsins: SSFOs-
AAV-Syn-CoChR-GFPVirus constructNeural Activators - Chronos/Chrimson (no AAV6)-
AAV-EF1a-DIO-hChR2(E123T/T159C)-mCherryVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-EF1a-DIO-SwiChRCA-TS-EYFP-WPREVirus constructSwiChRCA  (AAV2, 5, DJ)-
AAV-hSyn-Coff/Fon EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-EF1a-fDIO-hChR2(H134R)-EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-EF1a-mCherry-IRES-Cre-WPREVirus constructINTRSECT (AAV5)-
AAV-CaMKIIa-OptoB2-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-CaMKIIa-hChR2(C128S/D156A)-mCherry Virus constructStabilized Step Function Opsins: SSFOs-
AAV-EF1a-DIO-ChR2(T159C)-EYFPVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-CaMKII-GFP (AAV2, 5 & 8)Virus constructControl Vectors-
AAV5-hSyn-hChR2(H134R)-EYFP Virus constructOptical Excitation: ChR4-
AAV-CAG-FLEX-ArchT-GFPVirus constructNeural Silencers-
AAV-CaMKIIa-eNpHR3.0-EYFP Virus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CamKII-Jaws-KGC-GFP-ER2Virus constructNeural Silencers - Jaws (Halo57) (no AAV6)-
AAV-hSyn-eNpHR3.0-mCherry Virus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CAG-ArchT-tdTomatoVirus constructNeural Silencers (no AAV6)-
AAV-Syn-Chronos-GFPVirus constructNeural Activators - Chronos/Chrimson (no AAV6)-
AAV-EF1a-DIO-OptoA1-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-nEF-Coff/Fon hChR2(H134R)-EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-CaMKIIa-hChR2(E123T/T159C)-EYFPVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-hSyn-EYFP Virus constructControl Fluorophores-
AAV-EF1a-DIO-eArch3.0-EYFPVirus constructThird-generation Optogenetic Inhibition: Arch 3.0 & ArchT 3.0-
AAV-EF1a-DIO-OptoB2-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-EF1a-DIO-OptoA1-mCherryVirus constructOpto-XRs  (AAV5)-
AAV-Syn-ChrimsonR-tdTomatoVirus constructNeural Activators - Chronos/Chrimson (no AAV6)-
AAV-EF1a-DIO-hChR2(E123T/T159C)-p2A-EYFP-WPREVirus constructCell Filling Variants-
AAV-EF1a-DIO-hChR2(E123T/T159C)-EYFPVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-hSyn-Coff/Fon hChR2(H134R)-EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-EF1a-DIO-mCherryVirus constructControl Fluorophores-
AAV-CaMKIIa-C1V1(t/t)-TS-p2A-EYFP-WPREVirus constructCell Filling Variants-
AAV-EF1a-DIO-C1V1(t/t)-TS-p2A-mCherry-WPREVirus constructCell Filling Variants-
AAV-Syn-CsChR-GFPVirus constructNeural Activators - Chronos/Chrimson (no AAV6)-
AAV-hSyn-C1V1(t/t)-TS-EYFPVirus constructC1V1(t/t)  (AAV2, 5, DJ)-
AAV-hSyn-hChR2(H134R)-mCherry Virus constructOptical Excitation: ChR51
AAV-EF1a-DIO-C1V1(E162T)-TS-p2A-EYFP-WPREVirus constructCell Filling Variants-
AAV-EF1a-DIO-OptoD1-EYFPVirus constructOpto-XRs  (AAV5)-
AAV-EF1a-DIO-C1V1(E162T)-TS-p2A-mCherry-WPREVirus constructCell Filling Variants-
AAV-nEF-Con/Foff hChR2(H134R)-EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-CAG-FLEX-tdTomatoVirus constructControl Vectors-
AAV-hSyn-Jaws-GFP-ER2Virus constructNeural Silencers - Jaws (Halo57) (no AAV6)-
AAV-hSyn-FLEX-Chronos-GFPVirus constructNeural Activators - FLEX Chronos/Chrimson (no AAV6)-
AAV-synP-DIO-sTpE  (Addgene 52474)Virus constructMonosynaptic Tracing-
AAV-hSyn-C1V1(t/t)-TS-p2A-EYFPVirus constructC1V1(t/t)  (AAV2, 5, DJ)-
AAV-Syn-Flex-STPEPtTAVirus constructMonosynaptic Tracing-
AAV-TRetight-BPB19GVirus constructMonosynaptic Tracing-
AAV-EF1a-Cre-WPREVirus constructINTRSECT (AAV5)-
AAV-GFAP-hChR2(H134R)-EYFPVirus constructOptical Excitation: ChR2-GFAP (AAV1, 2, 5 & 8)-
AAV-hThy1-eNpHR3.0-EYFP Virus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-synP-DIO-sTpEpB  (Addgene 52473)Virus constructMonosynaptic Tracing-
AAV-EF1a-mCherry-IRES-WGA-Cre Virus constructTranssynaptic Tracers: WGA-Cre (AAV2, 5 & 8)-
AAV-CAG-ChR2-GFPVirus constructNeural Activators-
AAV-EF1a-DIO-eNpHR3.0-EYFP Virus constructThird-generation Optogenetic Inhibition: eNpHR3.0-
AAV-CAG-FLEX-ArchT-tdTomatoVirus constructNeural Silencers (no AAV6)-
AAV-CaMKIIa-C1V1(E162T)-TS-p2A-EYFP-WPREVirus constructCell Filling Variants-
AAV-CaMKIIa-hChR2(E123T/T159C)-mCherryVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-hSyn-Flex-Jaws-KGC-GFP-ER2(AAV8 only currently)Virus constructNeural Silencers - Jaws (Halo57) (no AAV6)-
AAV-hSyn-FLEX-ChrimsonR-tdTomatoVirus constructNeural Activators - FLEX Chronos/Chrimson (no AAV6)-
AAV-CaMKIIa-EYFPVirus constructControl Fluorophores-
AAV-CaMKIIa-C1V1(E162T)-TS-p2A-mCherry-WPREVirus constructCell Filling Variants-
AAV-hSyn-Con/Foff EYFP-WPREVirus constructINTRSECT (AAV5 & DJ)-
AAV-hSyn-Jaws-KGC-GFP-ER2Virus constructNeural Silencers - Jaws (Halo57) (no AAV6)-
AAV-CaMKII-hChR2(E123T/T159C)-p2A-mCherry-WPREVirus constructCell Filling Variants-
AAV-CaMKII-hChR2(E123A)-mCherryVirus constructSecond-generation Ultrafast Optogenetic Control-
AAV-CAG-ArchT-GFPVirus constructNeural Silencers-
AAV-CaMKII-hChR2(T159C)-p2A-mCherry-WPREVirus constructCell Filling Variants-
AAV-CAG-Arch-GFPVirus constructNeural Silencers (no AAV6)-
AAV-CaMKIIa-eArch3.0-EYFPVirus constructThird-generation Optogenetic Inhibition: Arch 3.0 & ArchT 3.0-
AAV-GFAP104-mCherryVirus constructGFAP Vectors (AAV8)-
AAV-hSyn-eArch3.0-EYFPVirus constructThird-generation Optogenetic Inhibition: Arch 3.0 & ArchT 3.0-
AAV-CAG-tdTomatoVirus constructControl Vectors-
AAV-EF1a-mCherry-IRES-Flpo-WPREVirus constructINTRSECT (AAV5)-
AAV-CaMKIIa-eNpHR3.0-mCherry Virus constructThird-generation Optogenetic Inhibition: eNpHR3.01

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Consumables

Consumables refer to items that are intended to be used once or have a limited lifespan before they need to be replaced. These include materials and products that are consumed or depleted during the course of experiments or procedures. Consumables are critical for maintaining the integrity, accuracy, and reproducibility of scientific experiments. In BrainSTEM, consumables are a shared model across users.

Types of consumable

  • Optic fiber designs: Thin, flexible fibers used for transmitting light signals, crucial for optical neural imaging and optogenetic manipulation of neurons.
  • Silicon probe designs: Microfabricated devices designed for recording or stimulating neural activity, allowing for high-resolution interfacing with neural tissue.
  • Virus constructs: Genetically engineered viruses used for delivering genes into neurons, enabling the study of gene function or the manipulation of neural activity.
  • Wire electrodes: Thin metal wires used for recording electrical signals from or delivering electrical stimulation to neurons, essential for electrophysiological studies.

Submission process

Anyone can submit consumables or submit changes to existing ones, but all submissions must be approved before they are available for usage. Please see existing entries for examples as to what to submit.

Fields

  • Name: The name of the consumable (required; must be unique).
  • Type: The type of consumable - see available types above (required).
  • Supplier: The supplier of the consumable (required).
  • Description: A description of the consumable.
  • Type specific fields: Each type has custom fields (required).

Permissions

Once a entry has been approved it becomes available to everyone.

API Access

The API allows for programmable access, enabling you to read, edit, and delete entries through the API. For details about the fields and data structure, refer to the Consumables API endpoint documentation.