Consumables

pAAV-hSyn-EGFPVirus constructPI: Roth. Activity: Constitutive-
AAV-EF1a-DIO-GCaMP6s-P2A-nls-dTomatoVirus constructPI: Ting. Activity: Cre dependent-
pAAV-synapsin-HaloCaMP1b-EGFPVirus constructPI: Schreiter. Activity: Constitutive-
pAAV-syn-FlpoVirus constructPI: Wickersham-
pAAV-hsyn-GRAB_DA-mutVirus constructPI: Li. Activity: Constitutive-
pAAV-hSyn-DIO-HA-hM3D(Gq)-IRES-mCitrineVirus constructCre requirement: Cre-dependent. PI: Roth-
pAAV-ihSyn1-DIO-tTAVirus constructExpression System: Cre-dependent and inducible Synapsin promoter (ihSyn). Activity: Cre-dependent expression of the tet-off transactivator (tTA) with a positive feedback loop for amplified tTA expression.. PI: Gradinaru-
AAV-Syn-H2B-jGCaMP8s-WPREVirus constructPI: Looger. Activity: Constitutive-
pAAV-hSyn-GRAB_DA1mVirus constructPI: Li. Activity: Constitutive-
pAAV.Syn.Flex.GCaMP6m.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Cre dependent-
pAAV-mDlx-GCaMP6f-Fishell-2Virus constructPI: Fishell. Activity: Constitutive-
pAAV-CAG-DIO-ChR2(H134R)-eYFPVirus constructActivity: Cre dependent. PI: Gradinaru-
pAAV-Ef1a-Con/Foff 2.0-GCaMP6MVirus constructPI: Deisseroth. Activity: Cre dependent-
pAAV-Ef1a-sRGECOVirus constructPI: Deisseroth. Activity: Constitutive-
pAAV-GFAP-hM3D(Gq)-mCherryVirus constructCre requirement: none. PI: Roth-
pAAV-CaMKIIa(0.4)-eOPN3-mScarlet-WPREVirus constructActivity: Constitutive. PI: Yizhar-
AAV-EF1a-jGCaMP8f-WPREVirus constructPI: Looger. Activity: Constitutive-
pAAV-double floxed-eNpHR-EYFP-WPRE-pAVirus constructActivity: Cre dependent. PI: Deisseroth-
pAAV-hSynapsin-FLEX-soCoChR-GFPVirus constructActivity: Cre dependent. PI: Boyden-
pGP-AAV-GFAP-iGABASnFR2-WPREVirus constructPI: GENIE. Activity: Constitutive-
pAAV.TBG.PI.Null.bGHVirus constructPI: Wilson. Activity: Constitutive-
pAAV.hSyn.iGluSnFR3.v857.PDGFRVirus constructPI: Podgorski. Activity: Constitutive-
pAAV.GFAP.eGFP.WPRE.hGHVirus constructPI: Wilson. Activity: Constitutive-
pAAV.CAG.iAChSnFRVirus constructPI: Looger. Activity: Constitutive-
pLVX-EF1alpha-SARS-CoV-2-M-2xStrep-IRES-PuroVirus constructExpresses SARS-CoV-2 M protein. Puromycin resistance. EF1a promoter. PI: Krogan.-
AAV-hSyn1-GCaMP6f-P2A-nls-dTomatoVirus constructPI: Ting. Activity: Constitutive-
pAAV.CAG.Flex.NES-jRCaMP1b.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Cre dependent-
pAAV_hSyn-SIO-stChrimsonR-EGFP-P2A-PdCO-miniWPREVirus constructActivity: Cre dependent. PI: Yizhar-
pAAV-syn-FLEX-splitTVA-EGFP-tTAVirus constructThese AAV together can be used to complement deletion-mutant rabies virus. PI: Wickersham.-
AAV-Syn-H2B-jGCaMP8m-WPREVirus constructPI: Looger. Activity: Constitutive-
pAAV-nEF-Coff/Fon-Arch3.3-p2a-EYFPVirus constructActivity: Flp dependent. PI: Deisseroth-
pAAV_hSyn-DIO-PdCO-mScarlet-WPREVirus constructActivity: Cre dependent. PI: Yizhar-
pAAV.CMV.PI.EGFP.WPRE.bGHVirus constructPI: Wilson. Activity: Constitutive-
pAAV.CAG.hChR2(H134R)-mCherry.WPRE.SV40Virus constructActivity: Constitutive. PI: Deisseroth-
pAAV-CaMKIIa-C1V1 (t/t)-TS-EYFPVirus constructActivity: Constitutive. PI: Deisseroth-
pAAV-hSynapsin1-axon-GCaMP6mVirus constructPI: Tian. Activity: Constitutive-
pAAV-CaMKIIa-eNpHR 3.0-EYFPVirus constructActivity: Constitutive. PI: Deisseroth-
pENN.AAV.CB7.CI.mCerulean.WPRE.RBGVirus constructPI: Wilson. Activity: Constitutive-
pAAV-hsyn-GRAB_rDA-mutVirus constructPI: Li. Activity: Constitutive-
pAAV-Ef1a-Coff/Fon-sRGECOVirus constructPI: Deisseroth. Activity: Flp dependent-
pGP-AAV-GFAP-iGABASnFR2(no bind)-WPREVirus constructPI: GENIE. Activity: Constitutive-
pAAV-nEF-Con/Fon DREADD Gi-mCherryVirus constructCre requirement: Cre and Flp-dependent. PI: Deisseroth-
AAV-CamKIIa-jGCaMP8m-WPREVirus constructPI: Looger. Activity: Constitutive-
pAAV-hsyn-GRAB_rDA1mVirus constructPI: Li. Activity: Constitutive-
pGP-AAV-syn-FLEX-Volton2-ST-WPREVirus constructPI: GENIE. Activity: Cre dependent-
pAAV.hSyn1.Twitch2B.WPRE.SV40Virus constructPI: Griesbeck. Activity: Constitutive-
pAAV-Ef1a-DIO mScarletVirus constructPI: Deisseroth. Activity: Cre dependent-
pAAV-Ef1a-Con/Fon/Von GCaMP 6mVirus constructPI: Deisseroth. Activity: Cre, Flp and VCre dependent-
pAAV-EF1α-F-FLEX-mNaChBac-T2A-tdTomatoVirus constructExpression System: EF1a-driven, Flp-dependent. Activity: Flp-dependent expression of the voltage-gated Na+ channel mNaChBac and (physically separate) tdTomato. PI: Scanziani-
AAV pEF1a-DIO-FLPo-WPRE-hGHpAVirus constructPI: Zhang-
pGP-AAV-syn-FLEX-jGCaMP8f-WPREVirus constructPI: GENIE. Activity: Cre dependent-
pAAV-CBh-mKate2-IRES-MCS (WT-WT)Virus constructPI: Patrick. Activity: Constitutive-
pAAV-EF1a-Con/Fon-GCaMP6MVirus constructPI: Deisseroth. Activity: Cre and Flp dependent-
pGP-AAV-syn-FLEX-jGCaMP7s-WPREVirus constructPI: Kim. Activity: Cre dependent-
pAAV-CBh-mKate2-IRES-MCS (C-gap-WT)Virus constructPI: Patrick. Activity: Constitutive-
pAAV-nEF-Con/Foff 2.0-ChR2-mCherryVirus constructActivity: Cre dependent. PI: Deisseroth-
pAAV-CAG-FLEX-rc [Jaws-KGC-GFP-ER2]Virus constructActivity: Cre dependent. PI: Boyden-
pAAV-hsyn-GRAB_DA2hVirus constructPI: Li. Activity: Constitutive-
AAV SYN flex PSAM4 GlyR IRES EGFPVirus constructCre requirement: Cre-dependent. PI: Sternson-
pAAV-CAG-FLEXFRT-ChR2(H134R)-mCherryVirus constructActivity: Flp dependent. PI: Cepko-
pAAV-Ef1a-DIO-PPO-VenusVirus constructActivity: Cre dependent. PI: Bruchas-
pAAV-Ef1a-Con/Foff 2.0-oScarletVirus constructPI: Deisseroth. Activity: Cre dependent-
pAAV-CAG-fDIO-mNeonGreenVirus constructPI: Gradinaru. Activity: Flp dependent-
pAAV-EF1a-iCreVVirus constructPI: Zeng-
pAAV.CAG.GCaMP6s.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Constitutive-
pAAV-CAG-eYFPVirus constructPI: Gradinaru. Activity: Constitutive-
pAAV-hSyn-mCherryVirus constructPI: Deisseroth. Activity: Constitutive-
AAV-EF1a-DIO-GCaMP6f-P2A-nls-dTomatoVirus constructPI: Ting. Activity: Cre dependent-
pENN.AAV.CAG.Flex.GFPsm_myc.WPRE.SV40Virus constructPI: Looger. Activity: Cre dependent-
pAAV.Syn.NES-jRGECO1b.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Constitutive-
pAAV-CaMKIIa-ChRmine-mScarlet-Kv2.1-WPREVirus constructActivity: Constitutive. PI: Deisseroth-
pAAV-hSyn-DIO-mCherryVirus constructPI: Roth. Activity: Cre dependent-
pLenti CMV GFP Hygro (656-4)Virus construct3rd-gen lentiviral GFP expression vector. CMV promoter. Hygromycin resistance. PI: Campeau.-
pAAV-nEF-Con/Fon-ChRmine-oScarletVirus constructActivity: Cre and Flp dependent. PI: Deisseroth-
pGP-AAV-CAG-FLEX-jGCaMP8m-WPREVirus constructPI: GENIE. Activity: Cre-dependent1
pAAV.CAG.Flex.NES-jRCaMP1a.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Cre dependent-
pAAV.CAG.Flex.Ruby2sm-Flag.WPRE.SV40Virus constructPI: Looger. Activity: Cre dependent-
AAV-CAG-FLPX-rc [ChrimsonR-tdTomato]Virus constructActivity: Flp dependent. PI: Boyden-
pAAV_hSyn-PdCO-mScarlet-WPREVirus constructActivity: Constitutive. PI: Yizhar-
pAAV-hSyn-mScarletVirus constructPI: Deisseroth. Activity: Constitutive-
pAAV-Ef1a-Con/Fon-mCherryVirus constructPI: Deisseroth. Activity: Cre and Flp dependent-
pAAV-S5E2-GFP-fGFPVirus constructPI: Dimidschstein. Activity: Constitutive-
pAAV.CAG.Flex.NES-jRGECO1b.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Cre dependent-
pAAV-hSyn-DIO-ChrimsonR-mRuby2-STVirus constructActivity: Cre dependent. PI: Adesnik-
pAAV-CaMKIIa-HA-hM4D(Gi)-IRES-mCitrineVirus constructCre requirement: none. PI: Roth-
pAAV-hSyn-GRAB_ACh3.0Virus constructPI: Li. Activity: Constitutive-
pAAV-CAG-tTAVirus constructExpression System: CAG-driven, constitutive. Activity: Expression of the tet-off transactivator (tTA). PI: Gradinaru-
AAV-CAG-jGCaMP8m-WPREVirus constructPI: Looger. Activity: Constitutive-
pZac2.1-GfaABC1D-lck-jGCaMP8mVirus constructPI: Looger. Activity: Constitutive-
pAAV-hSynapsin1-axon-jGCaMP8m-P2A-mRuby3Virus constructPI: GENIE. Activity: Constitutive-
Morris CellTag Barcode Library Version 3Virus construct5,737 barcodes for single-cell clonal analysis. Expresses EGFP. PI: Morris.-
lentiCas9-BlastVirus constructExpresses S. pyogenes Cas9. Blasticidin resistance. EFS promoter. PI: Zhang.-
pAAV-Ef1a-fDIO-ChrimsonR-tdTomatoVirus constructActivity: Flp dependent. PI: Jensen-
pAAV.Syn.Flex.NES-jRGECO1a.WPRE.SV40Virus constructPI: Kim , GENIE. Activity: Cre dependent-
pENN.AAV.CB7.CI.eGFP.WPRE.rBGVirus constructPI: Wilson. Activity: Constitutive-
pAAV-Ef1a-oScarletVirus constructPI: Deisseroth. Activity: Constitutive-
pAAV-mDlx-ChR2-mCherry-Fishell-3Virus constructActivity: Constitutive. PI: Fishell-
AAV.rTH.PI.Cre.SV40Virus constructPI: Wilson-
pENN.AAV.hSyn.HI.eGFP-Cre.WPRE.SV40Virus constructPI: Wilson-
pAAV-CaMKIIa-hChR2(H134R)-mCherryVirus constructActivity: Constitutive. PI: Deisseroth-

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Consumables

Consumables refer to items that are intended to be used once or have a limited lifespan before they need to be replaced. These include materials and products that are consumed or depleted during the course of experiments or procedures. Consumables are critical for maintaining the integrity, accuracy, and reproducibility of scientific experiments. In BrainSTEM, consumables are a shared model across users.

Types of consumable

  • Optic fiber designs: Thin, flexible fibers used for transmitting light signals, crucial for optical neural imaging and optogenetic manipulation of neurons.
  • Silicon probe designs: Microfabricated devices designed for recording or stimulating neural activity, allowing for high-resolution interfacing with neural tissue.
  • Virus constructs: Genetically engineered viruses used for delivering genes into neurons, enabling the study of gene function or the manipulation of neural activity.
  • Wire electrodes: Thin metal wires used for recording electrical signals from or delivering electrical stimulation to neurons, essential for electrophysiological studies.

Submission process

Anyone can submit consumables or submit changes to existing ones, but all submissions must be approved before they are available for usage. Please see existing entries for examples as to what to submit.

Fields

  • Name: The name of the consumable (required; must be unique).
  • Type: The type of consumable - see available types above (required).
  • Supplier: The supplier of the consumable (required).
  • Description: A description of the consumable.
  • Type specific fields: Each type has custom fields (required).

Permissions

Once a entry has been approved it becomes available to everyone.

API Access

The API allows for programmable access, enabling you to read, edit, and delete entries through the API. For details about the fields and data structure, refer to the documentation.