Consumables

hSyn1-dlox-jGCaMP8s(rev)-dlox-WPRE-SV40p(A)Virus constructsingle-stranded genome-
FG105ACAOptic fiber designØ105 µm Core, 0.22 NA, Solarization-Resistant Step-Index Multimode Fiber, Acrylate-Coated-
rAAV-CAG-hChR2(H134R)-mCherry-WPRE-hGH polyAVirus construct--
rAAV-CMV-EGFP-Tau-bGH polyAVirus construct--
shortCAG-FLPo-SV40p(A)Virus constructself-complementary genome-
rAAV-nEf1α-FDIO-TVA(T66)-mCherry-WPRE-hGH polyAVirus construct--
P-6/125DC-PMOptic fiber designPassive PM Fiber, Matched to YB1200-6/125DC-PM-
rAAV-CaMKIIa-OChIEF(E163A T199C)-mCherry-WPRE-hGH polyAVirus construct--
AAV9-hsyn-Ado1.0(B10)Virus constructTiter: ≥1*10E13vg/ml, 50ul-
hSyn1-chI-dlox-mTagBFP2_NLS(rev)-dlox-WPRE-bGHp(A)Virus constructsingle-stranded genome-
pTight-dlox-HA_hM3D(Gq)(rev)-dlox-WPRE-bGHp(A)-pRAM-d2tTA-SV40p(A)Virus constructsingle-stranded genome-
hSyn1-chI-EGFP-WPRE-bGHp(A)Virus constructsingle-stranded genome-
AAV9-hSyn-gACh3.5Virus constructTiter: ≥1*10E13vg/ml, 50ul-
hSyn1-chI-dFRT-EGFP_2A_FLAG_TeTxLC(rev)-dFRT-WPRE-hGHp(A)Virus constructsingle-stranded genome-
AAV9-hSyn-CRFmutVirus constructTiter: ≥1*10E13vg/ml, 50ul-
hSyn1-hNrxn3β_HA_CIB1_CaMKIIα(2x)_f-hLOV_TEVsite_FLAG_tTA-bGHp(A)Virus constructsingle-stranded genome-
rAAV-TRE3g-H2B-EGFP-F2A-TVA-T2A-RVG-hGH polyAVirus construct--
AAV-pgk-CreVirus constructPI: Aebischer-
pAAV-hSyn-GRAB_OT1.0Virus constructPI: Li. Activity: Constitutive-
hSyn1-chI-Mito-Canlonic SF-WPRE-bGHp(A)Virus constructsingle-stranded genome-
hSyn1-chI-dlox-G-Flamp1(rev)-dlox-WPRE-bGHp(A)Virus constructsingle-stranded genome-
rAAV-CaMKIIa-tau-EGFP-WPRE-hGH polyAVirus construct--
FP1000URTOptic fiber design0.50 NA, Ø1000 µm Core Multimode Fiber, High OH-
rAAV-GFaABC1D-lck-GCaMp6f-SV40 polyAVirus construct--
AAV-hSyn-hChR2(H134R)-EYFP Virus constructOptical Excitation: ChR4-
AAV.TBG.PI.Cre.rBGeVirus constructPI: Wilson-
AAV-EF1a-DIO-hChR2(C128S/D156A)-mCherryVirus constructStabilized Step Function Opsins: SSFOs-
AAV-EF1a-DIO-hChR2(E123T/T159C)-p2A-mCherry-WPREVirus constructCell Filling Variants-
hGFAP-dlox-mScarlet-I(rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-
pLenti-SV40-PURO-CMV-GFPVirus constructTiter: 1x10^8 IU/mL-
rAAV-TRE3G-DIO-hM3D(Gq)-mCherry-WPRE-hGHpAVirus construct--
hSyn1-chI-dlox-MTS1_MTS2_SypHer(rev)-dlox-WPRE-bGHp(A)Virus constructsingle-stranded genome-
shortCAG-(pre)mGRASP_mCerulean-WPRE-SV40p(A)Virus constructsingle-stranded genome-
hEF1α-dlox-hChR2(H134R)_EYFP(rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-
shortCAG-dlox-iGluSnFR3.v857.PDGF_2A_NES_jRGECO1a(rev)-dlox-bGHp(A)Virus constructsingle-stranded genome-
hEF1α-dLight1.1-WPRE-bGHp(A)Virus constructsingle-stranded genome-
shortCAG-dlox-jGCaMP8m(rev)-dlox-WPRE-SV40p(A)Virus constructsingle-stranded genome-
pAAV-EF1a-CreVirus constructPI: Deisseroth-
AAV9-hSyn-r5HT2.0mutVirus constructTiter: ≥1*10E13vg/ml,50ul-
hPDGFβ-chI-loxP-EGFP-loxP-SV40p(A)Virus constructself-complementary genome-
hSyn1-chI-dFRT-EGFP(rev)-dFRT-WPRE-bGHp(A)Virus constructsingle-stranded genome-
rCRF-chI-EGFP_2A_iCre-WPRE-hGHp(A)Virus constructsingle-stranded genome-
AAV9-hsyn-NE2lVirus constructTiter: ≥1*10E13vg/ml, 50ul-
shortCAG-dlox-(pre)eGRASP(p32; green)(rev)-dlox-WPRE-bGHp(A)Virus constructsingle-stranded genome-
rAAV-EF1α-fDIO-DTA-WPRE-hGH polyAVirus construct--
hSyn1-chI-dlox-EBFP2_2A_FLPo(rev)-dlox-WPRE-SV40p(A)Virus constructsingle-stranded genome-
rAAV-hSyn-DIO-hM4D(Gi)-mCherry-WPRE-hGH polyAVirus construct--
hGFAP-melanopsin_mCherry-WPRE-hGHp(A)Virus constructsingle-stranded genome-
FZM10020Optic fiber designØ100 µm Core, 0.20 NA, ZBLAN Multimode Fiber-
rAAV-EF1α-DIO-axon-GCaMP6f-WPRE-hGH polyAVirus construct--
hSyn1-mCherry-WPRE-hGHp(A)Virus constructsingle-stranded genome-
hSyn1-dlox-mScarlet-I(rev)-chI[2x:sh(NS)](rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-
Buzsaki32LSilicon probe designNeuroNexus 32ch, 4 shanks, staggered, buzsaki-style, 200µm shank spacing, 10mm shanks (Buzsaki32L)-
hSyn1-GCaMP6m-XC-WPRE-hGHp(A)Virus constructsingle-stranded genome-
AAV5-hsyn-NE2m(NE3.1)Virus constructTiter: ≥1*10E13vg/ml, 50ul-
hEF1α-dlox-nGRPAPHIC_2A_H2BJ_mCherry(rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-
AAV-mDlx-jGCaMP8f-WPREVirus constructPI: Looger. Activity: Constitutive-
AAV1-CAG-DIO-GFPVirus constructTiter: ≥1*10E13vg/ml Volume: 50ul-
AAV-hSyn-OptoD1-EYFPVirus constructOpto-XRs  (AAV5)-
hSyn1-dlox- jGCamp7b_2A_mRuby3(rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-
P3-chI[4x:sh(NS)]-EGFP-WPRE-bGHp(A)Virus constructsingle-stranded genome-
mCaMKIIα(short)-lox71-(pre)eGRASP(p32; green)_2A_3xNLS_mScarlet3-lox66-WPRE-bGHp(A)Virus constructsingle-stranded genome-
rAAV-CAG-EGFP-WPRE-hGH polyAVirus construct--
hGFAP-dlox-Laconic(rev)-chI(rev)-dlox-WPRE-hGHp(A)Virus constructsingle-stranded genome-

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Consumables

Consumables refer to items that are intended to be used once or have a limited lifespan before they need to be replaced. These include materials and products that are consumed or depleted during the course of experiments or procedures. Consumables are critical for maintaining the integrity, accuracy, and reproducibility of scientific experiments. In BrainSTEM, consumables are a shared model across users.

Types of consumable

  • Optic fiber designs: Thin, flexible fibers used for transmitting light signals, crucial for optical neural imaging and optogenetic manipulation of neurons.
  • Silicon probe designs: Microfabricated devices designed for recording or stimulating neural activity, allowing for high-resolution interfacing with neural tissue.
  • Virus constructs: Genetically engineered viruses used for delivering genes into neurons, enabling the study of gene function or the manipulation of neural activity.
  • Wire electrodes: Thin metal wires used for recording electrical signals from or delivering electrical stimulation to neurons, essential for electrophysiological studies.

Submission process

Anyone can submit consumables or submit changes to existing ones, but all submissions must be approved before they are available for usage. Please see existing entries for examples as to what to submit.

Fields

  • Name: The name of the consumable (required; must be unique).
  • Type: The type of consumable - see available types above (required).
  • Supplier: The supplier of the consumable (required).
  • Description: A description of the consumable.
  • Type specific fields: Each type has custom fields (required).

Permissions

Once a entry has been approved it becomes available to everyone.

API Access

The API allows for programmable access, enabling you to read, edit, and delete entries through the API. For details about the fields and data structure, refer to the documentation.